AB1 Sequencing Traces To Sequence Tables Web Application
Extract called bases, available quality scores and trace positions into FASTA files and companion CSV tables.
Category Directory
Convert scientific measurements, laboratory data and research files.
Extract called bases, available quality scores and trace positions into FASTA files and companion CSV tables.
Convert supported Axon ABF recordings into time-and-signal CSV files organized by channel and sweep using recorded scaling.
Convert supported AGS4 groups into separate Excel sheets while retaining original field strings, units, types and record links.
Convert supported AIA/ANDI netCDF chromatograms into time-and-signal CSV files with available sample and detector information.
Convert filter weighings, supplied blank corrections, and sampled air volumes into particulate-concentration tables.
Convert alkalinity tables between equivalent-based units and mass-as-calcium-carbonate units while retaining original values.
Extract query, hit and alignment statistics from supported BLAST XML files into filterable CSV tables.
Convert vertical sample depths into elevations using supplied collar elevations and a stated vertical reference.
Create depth-scaled borehole PDF and SVG logs from supplied strata, sample and water-observation tables.
Import certificate PDFs and an equipment roster. Extract serial numbers and explicitly stated due dates with page references. Export a reminder calendar and a missing-certificate list.
Convert TOA5 text exports into channel tables while retaining station, program, timestamp, record, units and processing information.
Convert cement calorimeter exports into cumulative heat per gram using supplied sample masses and baseline settings.
Combine concrete-core photographs with sample IDs, locations and depth intervals to create labeled PDF inspection sheets and a photo index.
Convert concrete-core measurements and failure loads into results tables and a printable report with uncorrected measured strength.
Convert concrete comparator readings into specimen length-change and shrinkage-strain tables with plots over time.
Convert concrete curing-temperature logs into cumulative time-temperature maturity records using a supplied datum temperature.
Convert oedometer dial readings and specimen heights into strain-time tables separated by load stage.
Convert absorbance, fractional transmittance and percentage transmittance tables while identifying values incompatible with the selected conversion.
Apply supplied linear assay curves with explicit units, dilution and calibration-range flags.
Convert integrated injection heats into molar-heat tables using supplied injection amounts, dilution corrections and normalization settings.
Combine supported cell-counter exports into sample tables containing cell concentrations, viability measurements, and dilution information.
Combine CellProfiler measurement exports and sample metadata into per-image and per-sample summary tables.
Split exported multi-detector tables into labeled channel files while retaining each channel’s original time coordinates.
Apply supplied linear chromatography calibrations with explicit units, dilution and calibration-range flags.
Combine exported peak tables while retaining sample, injection, detector, retention-time and area information, with an optional matrix of supplied compound names.
Convert circular-dichroism readings into molar or mean-residue ellipticity using supplied concentration, path length and molecular information.
Extract labeled spillover or compensation matrices, preserving channel order and identifying which matrix representation the source contains.
Convert positive and total partition counts into Poisson-adjusted concentrations using supplied partition volumes and dilution factors.
Convert measured activity tables into activity per mass of protein using supplied concentrations, volumes and dilution factors.
Convert explicitly selected Phred+33 and Phred+64 quality encodings while checking read lengths and destination score ranges.
Convert compatible count tables and matching feature or effective lengths into TPM values, reporting excluded and unmatched features.
Reshape explicitly mapped statistics columns into population, parameter, statistic and value records, with tagged summary rows kept separate.
Convert chromatography fraction logs into sample lists containing tube positions, collection windows and supplied sample identifiers.
Extract genes and other annotated features into tables containing coordinates, strand information and available qualifiers.
Convert exported image lengths and areas into physical units using the calibration assigned to each image.
Convert isotope-ratio tables into delta notation using supplied reference ratios, retaining the reference information with the results.
Fit selected intervals of plate readings and save rates, fit points and residual diagnostics.
Split supported integer-labeled segmentation images into individual object masks with an index of original object labels.
Convert frequency offsets and chemical shifts using the supplied reference and spectrometer frequency for the observed nucleus.
Extract OME image dimensions, supplied calibration, channel details and acquisition dates from OME-XML or bounded classic OME-TIFF headers.
Convert plate-shaped spreadsheets into well-by-well tables with plate, row and column identifiers.
Convert named long-table or matrix layouts into plate, well, time, channel and reading tables while retaining missing readings and source-cell references.
Join every plate-reading observation with a supplied plate map while retaining time, channel, units and unmatched or conflicting well records.
Convert qPCR Cq results into relative-expression tables using a selected reference target, calibrator samples, and amplification-efficiency settings.
Convert mapped qPCR readings and supplied experiment metadata into RDML 1.3 files, identifying missing definitions and conflicting readings.
Convert Raman wavelength tables into Raman-shift tables using the experiment’s excitation wavelength.
Convert aligned FASTA sequences into NEXUS files with declared sequence types and checks for inconsistent alignment lengths.
Convert spectral coordinate columns while retaining measured signal values and identifying changes in axis order.
Convert explicitly defined spectral-density tables using the required change-of-variable factor and corresponding output-density units.
Convert pixel-and-frame tracking tables into physical position, elapsed-time, and movement tables using supplied calibration.
Convert selected variants into sample-by-variant genotype matrices while retaining missing calls, allele definitions and ploidy information.
Map delimited CPT channel exports into standard tables with explicit units and source readings retained.
Convert direct-shear force and displacement measurements into stress-displacement tables and plots.
Convert DSC heat-flow exports into sample-normalized tables while retaining temperature, time, and run labels.
Extract selected EDF channels into separate CSV files with recorded physical scaling, timing and sampling rates.
Convert stack-gas concentration tables to a stated oxygen reference and wet- or dry-gas basis using supplied measurements.
Export stored flow-cytometry event values and parameter metadata to CSV with explicitly selected scaling options.
Convert nutrient-analysis tables between specified elemental and conventional oxide reporting bases while preserving original values.
Convert beam-test loads and dimensions into flexural-stress tables for supported three-point and four-point loading arrangements.
Convert flow and concentration records matched by exact timestamp into mass-rate and accumulated-load tables using the selected maximum gap.
Convert crucible, dried-sample, and ignited-sample weights into loss-on-ignition tables with furnace conditions recorded.
Convert gas-result tables between volume fractions and mass concentrations using the named gas, temperature, pressure and reference conditions.
Convert selected genomic features into BED coordinates and report annotations that cannot fit the chosen output fields.
Convert soil-hydrometer records into particle-size tables using the selected method and its required calibration and correction inputs.
Convert supported ImageJ regions of interest into labeled coordinate tables with optional image calibration.
Convert impedance measurements into geometry-normalized complex-conductivity tables using supplied specimen dimensions and a stated measurement model.
Convert incubation gas measurements into sample-normalized production tables using supplied vessel, sampling, temperature, pressure and specimen information.
Convert supported single-block AFFN JCAMP-DX spectra into scaled coordinate and signal CSV files with recorded units and metadata.
Map laboratory tables to a permitted, versioned client JSON schema while retaining raw results, bounds, qualifiers, limits and methods.
Convert recorded load-cell signals into force values using supplied calibration coefficients.
Convert compatible tandem-mass-spectral library records into MGF and report source fields the destination cannot retain.
Extract peptide identifications, spectrum references and reported scores into linked CSV tables.
Extract stored chromatogram traces from mzML files into CSV with time, intensity and available transition information.
Extract selected mzML spectra into CSV tables containing mass-to-charge values, intensities and scan identifiers.
Separate mixed result text into value, qualifier and supplied reporting-limit columns, flagging nondetects whose limits are missing.
Convert concentration tables between elemental nitrogen or phosphorus reporting and explicitly selected chemical-species reporting bases.
Convert particle-counter exports into differential and cumulative size-distribution tables using the recorded bin boundaries.
Convert supported constant-head and falling-head laboratory records into hydraulic-conductivity tables.
Convert supplied absolute or vented logger pressures into head and optional elevation using explicit density and matched barometric records.
Convert tipping-bucket event timestamps into interval rainfall totals using the gauge’s supplied calibration.
Extract eligible raw amplification and melting observations from supported RDML files into separate RDES tables with sample, target and dye identities.
Convert drilling-run measurements and classified core-piece lengths into core-recovery and rock-quality-designation tables.
Convert point-load failure loads and specimen measurements into point-load-index tables for supported specimen geometries.
Convert supported ASCII Sea-Bird CNV files into labeled tables while retaining variable units and cast metadata.
Convert sediment masses, trap areas and deployment times into mass-flux tables with collection intervals preserved.
Convert sieve openings and retained weights into percent-retained, cumulative-retained and percent-passing tables with grading curves.
Convert soil-carbon measurements into layer-by-layer stock tables using supplied depths, bulk densities and coarse-fragment measurements.
Convert container, wet-soil and dry-soil weights into batch water-content tables while retaining the original weighings.
Convert sand, silt and clay percentages into labeled texture-triangle plots using a selected classification system.
Convert timestamped irradiance measurements into accumulated solar-energy tables using a selected integration method and explicit gap handling.
Extract spectra from supported Galactic SPC files into CSV files with their recorded axis units and sample information.
Convert measured specimen loads and extensions into engineering stress-strain tables, specimen curves and a PDF summary.
Convert thermogravimetric mass readings into remaining-mass and mass-loss percentages with the reference mass recorded.
Package supported TIFF stacks as OME-TIFF using supplied channel names, dimension order, pixel sizes and acquisition intervals.
Convert saved USGS RDB files into Excel tables while preserving station identifiers, parameter codes, timestamps, and qualifiers.
Convert dissolved-ion concentrations into milliequivalents per liter using specified ion identities and charge states.
Convert wet-soil density and dry-basis water-content records into dry-density tables.
Convert sample concentrations using measured moisture content while retaining the original result and the selected reporting-basis definition.
Convert wind speed and direction records into eastward and northward components with the direction convention and units stated.
Extract supported XRDML scans into coordinate-and-intensity files while retaining recorded units, counting times and measurement settings.